Sometimes it might be of interest to extract the image data below a label for specific purposes (similar to export the image below an area list in TrakEM2). This can be done by attaching the Arithmetic tool to the image data (InputA) and the label field (InputB) and furthermore using the following expression: (B==1)*A+(B!=1)*120 This […]
Arithmetic tool
Extracting specific labels from label fields in Amira
In order to post process and visualize single labels individually, they have to be extracted from the label field. This can be done with the Arithmetic tool and the knowledge of the order of labels (0 = exterior, 1 = interior, 2-X = own labels). Attach the Arithmetic tool module to the label field and […]